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Table of contents
INTRODUCTION
OBJECTIVE AND HYPOTHESIS
THESIS STRUCTURE
CHAPTER 1 LITERATURE REVIEW
1.1. Land use and land cover
1.1.1. Definition and transition
1.1.2. Specifics of tropics and rural areas in developing countries
1.2. Consequences of land use change
1.2.1. Physical/ Hydrological perspective
1.2.2. Sources, forms and characteristics of organic carbon
1.3. Aquatic microbial community
1.3.1. Free living (FL) and Particles Attached (PA) bacteria
1.3.2. Factors controlling microbial community
1.3.3. Microbial degradation of DOC
1.3.4. Links between bacterial diversity and functioning
CHAPTER 2 METHODOLOGY
2.1. Study sites
2.1.1. Dong Cao catchment
2.1.2. The Houay Pano catchment
2.2. Field work
2.2.1. Rain simulations and mesocosm/microcosm experiments
2.2.2. Sampling
2.3. Laboratory work
2.3.1. Measurement of DOC, nutrients and Chlorophyll a
2.3.2. Measurement of CDOM
2.3.3. Measurement of metabolic capacity
2.3.4. DNA extraction
2.4. Sequence processing and data analysis
2.5. Statistical analyses
CHAPTER 3 EFFECTS OF DIFFERENT RUNOFF ON AQUATIC BACTERIAL DIVERSITY AND FUNCTIONING AT MESOCOSM SCALES
3.1. Introduction
3.2. Methods
3.3. Results 63
3.4. Discussion
CHAPTER 4 LAND USE STRONGLY INFLUENCES SOIL ORGANIC CARBON AND BACTERIAL COMMUNITY LOSS IN RUNOFF IN TROPICAL UPLANDS
4.1. Introduction
4.2. Material and methods
4.3. Results.
4.4. Discussion
4.5. Conclusion
CHAPTER 5 EFFECT OF LAND USE CHANGE ON AQUATIC BACTERIAL DIVERSITY AND FUNCTION IN IN SITU INVESTIGATION SCALE
5.1. Vicinal land use change strongly drives stream bacterial community in a tropical montane catchment
5.1.1. Introduction
5.1.2. Materials and Methods
5.1.3. Results.
5.1.4. Discussion
5.1.5. Conclusion and perspectives
5.2. Impact of overland flow on particle-attached and free-living fractions during a flood event in an upland tropical catchment
5.2.1. Introduction
5.2.2. Material and methods
5.2.3. Results.
5.2.4. Discussion
5.2.5. Conclusion
CHAPTER 6 EFFECT OF OVERLAND FLOW FROM DIFFERENT LAND USE ON AQUATIC BACTERIAL DIVERSITY AND FUNCTIONING IN MICROCOSM SCALE
6.1. Introduction
6.2. Material and methods
6.3. Results and discussion
6.4. Conclusion
CHAPTER 7 GENERAL CONCLUSION AND FUTURE PERSPECTIVE
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