Topologically Associating Domains (TADs)

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Table of contents

SUMMARY ACKNOWLEDGEMENTS
INTRODUCTION 
Prologue: the paradigm of the X-inactivation centre
Review 1: X-chromosome inactivation: new insights into cis and trans regulation (review published in Current Opinion in Genetics & Development, 2015)
Review 2: Chromatin architecture and gene regulation during X-chromosome inactivation (review in preparation for Annual Review of Genetics, 2018)
Review 3: From promoters and enhancers to TADs and regulatory landscapes across development, disease and evolution (unpublished review)
RESULTS 
Article 1: Predictive polymer modelling reveals coupled fluctuations in chromosome conformation and transcription (published in Cell, 2014)
Article 2: Evidence for cross-TAD communication during X-inactivation via the noncoding Linx locus (manuscript in preparation)
Article 3: Genetic dissection of TAD organisation and function at the X-inactivation centre (manuscript in preparation)
Methods for Article 2 and Article 3
DISCUSSION & PERSPECTIVES
REFERENCES 
APPENDICES
Supplementary Results
Article 4: Xist-dependent imprinted X inactivation and the early developmental consequences of its failure (published in Nat Struct Mol Biol, 2017)

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